Plant GARDEN
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TOP > About the Species(Nicotiana tabacum var. TN90) > genome data >Gene sequences

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SNP Detection
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Data List

All Markers Trait-Related Loci
Nicotiana tabacum

CDS Sequence

CDS ID

lcl|NW_015952849.1_cds_XP_016492305.1_82530
CDS Infomation

[gene=LOC107811823] [db_xref=GeneID:107811823] [protein=heterogeneous nuclear ribonucleoprotein U-like protein 1 isoform X2] [protein_id=XP_016492305.1] [location=complement(join(77973..78076,78550..78882,78978..79170,79256..79314,79392..79500,79636..79824,79954..80717,84411..84543))] [gbkey=CDS]
Sequence

ATGGCGTCGGCGAAACGTGAATCATGTGTAAGTGACGAGCCTGAAGCCAAGAAAGCAAAG
GTTGAAGAAGGGCCATCACAGCTTCCAGTATCCACACCCCGTGTGGTTCTTAACCCCGCC
GATTGTGACTTAGATTTCAATGTTGAAGGAAATGGATTACAAGGTTCAGCGCTTTATGAG
CAAGGATTTGCTTATTGCTGGTCAGGTGCTCGAGCCAATATGGGAATCACTGGAGGAAAG
TACTGCTTTGGTTGCAGAATTGTTTCAGATCAGCCCGTAGACATGGAAGATACACCACTA
GATCAGCAACATCTCTGTCGTGTTGGCATCTCAAGGGGAGATGATGCAGTAGGAAACCTT
GGGGAAACCCTTCACAGTTTTGGGTTTGGGGGTACTGGAAAATTTTCAAGTCATGGACAG
TTTTCTGAATATGGTGAAAAATTTGGGGTTGGTGATACCATAATTTGTTGTGTTGACCTT
GAGTCTAGCCCTTTGGCTTCCATAGGTTTCTCTAAAAATGGGAAGTGGCTGGGAATAGCA
AAGCAATTTAATGCAGGTCCAACTGGCCTTGAAGTGGTGGATTGTCCAATGAAAAATCTA
CAGTGGCATTCAGCTCTTTTCCCTCATGTCTTGCTTAAAAATGTAGTTGTGCACATGCAG
TTTAGCATAGACGACGGATTAGCTCCTGTGGAAGGATATAGACCATGGTCTTGTGCCATG
GAAGATGGGAAAGCCATAACAGGCCCTAGCTTTCTGAATCTGTGCGATTGTGAAGTTATA
ATGATGGTAGGACTGCCTGCTTCCGGCAAGAGTACCTGGGCTGAGAAATGGGTGACGGAA
CATCCAGAAAAGCGATATGTTTTGCTTGGAACTAATTTGGCTTTGGATCTAATGAAGGTT
CCTGGTTTGCTGCGCAAAAATAACTATGGTGAAAGATTTGAACGTTTAATGGACCGCGCT
ACTGGAATATTCAACACTCTTTTGTCTAGGGCTTCCCGGATTCCTCGTAATTTCATAATT
GATCAGACAAATGTCTACAAAAATGCTCGCAAGCGCAAATTGAAGCCTTTTGCAAACTAT
AAGAAGATTGCTGTTGTGATTGTTCCAACACCTGAAGAGCTCAAGCTCCGTGGTGAGAAG
CGATTCAAAGAAATGGGCAAGGAGGTTCCTGCCGAAGCAGTAAATGAAATGTTAGTGAAT
TTCGTTTTACCTACGAGCAAAGATATGCCTCGAGCAGATGAGTACTTTGATGAGGTACGA
TTTGAAGAACTTGGCAGAGCGGAGGCTCAGAGATGCTTGGATGAGATGAAAGCAAACGTG
AATTCGAAGAGGGAAATTACCCCTTATTCTCGTGGAAGTTCTGTGCAGTCACTTAACAGC
CCATCAATGCAGCGCCATTGCCAATCATACAGTGGTTCCTCATTGCTGAGTCACAGAAAT
TTATCAGGTGGACAACCAAATAGTTCATATGCTCAGCCTCCACTGCAAGCACCTCGTGAA
ACCTACTTCGCGACCCCTTCCAGTTATGACCCCATGGGTGATTTTGGTTGCCATGAAAGT
CGCAGTGCCTATGGCAATTCAAGGGGATATGAGATGGAAGCTCAATCAGCTATCCGTGGA
GGGATTTATGAGCCTCATGCGGGTTATGGAGCTTGGAATGCAGCTGAGTTACACCGGAGC
AGCATGAATGATCCCTACTTGAGGACGTCTGGTGGTCCAAGATATCTTCCACCTGACTCA
AGAGGACCCGCTTTTGAATCGAGGATGCCAGCACCATATGGCTTTCCTCATGGGGTTCCA
GCTCCAAGACCGCCATATGGAAATTTTCCTTCCGGAGCACAGGATCCTGGTGTATACGCT
CCACCTCGTCCAAGATACTACTGA

Peptide Sequence

PEP ID

XP_016492305.1
PEP Infomation

PREDICTED: heterogeneous nuclear ribonucleoprotein U-like protein 1 isoform X2 [Nicotiana tabacum]
Sequence

MASAKRESCVSDEPEAKKAKVEEGPSQLPVSTPRVVLNPADCDLDFNVEGNGLQGSALYE
QGFAYCWSGARANMGITGGKYCFGCRIVSDQPVDMEDTPLDQQHLCRVGISRGDDAVGNL
GETLHSFGFGGTGKFSSHGQFSEYGEKFGVGDTIICCVDLESSPLASIGFSKNGKWLGIA
KQFNAGPTGLEVVDCPMKNLQWHSALFPHVLLKNVVVHMQFSIDDGLAPVEGYRPWSCAM
EDGKAITGPSFLNLCDCEVIMMVGLPASGKSTWAEKWVTEHPEKRYVLLGTNLALDLMKV
PGLLRKNNYGERFERLMDRATGIFNTLLSRASRIPRNFIIDQTNVYKNARKRKLKPFANY
KKIAVVIVPTPEELKLRGEKRFKEMGKEVPAEAVNEMLVNFVLPTSKDMPRADEYFDEVR
FEELGRAEAQRCLDEMKANVNSKREITPYSRGSSVQSLNSPSMQRHCQSYSGSSLLSHRN
LSGGQPNSSYAQPPLQAPRETYFATPSSYDPMGDFGCHESRSAYGNSRGYEMEAQSAIRG
GIYEPHAGYGAWNAAELHRSSMNDPYLRTSGGPRYLPPDSRGPAFESRMPAPYGFPHGVP
APRPPYGNFPSGAQDPGVYAPPRPRYY

Transcript Sequence

Gene sequence data has not been registered.